USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q9NYG1 USC-OGP 2-DE database:  Q9NYG1 Q9NYG1 General information about the entry View entry in simple text format Entry name Q9NYG1_HUMAN Primary accession number Q9NYG1 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description SubName: Full=Caldesmon 1, isoform CRA_b {ECO:0000313|EMBL:EAW83827.1}; SubName: Full=NAG22 protein {ECO:0000313|EMBL:AAF69498.3};. Gene name Name=CALD1 {ECO:0000313|EMBL:EAW83827.1} ORFNames=hCG_17453 {ECO:0000313|EMBL:EAW83827.1} Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_6-11 {PLATELET 6-11} Homo sapiens (Human)   map experimental info   PLATELET_6-11 MAP LOCATIONS: SPOT OGP-0865: pI=5.63; Mw=66570 Cross-references UniProtKB/TrEMBL Q9NYG1; Q9NYG1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/TrEMBL Extracted from UniProtKB/TrEMBL, release: 0.0 Entry name Q9NYG1_HUMAN Primary accession number Q9NYG1 Sequence was last modified on  June 1, 2001 (version 3) Annotations were last modified on  March 15, 2017 (version 91) Name and origin of the protein Description SubName: Full=Caldesmon 1, isoform CRA_b {ECO:0000313|EMBL:EAW83827.1}; SubName: Full=NAG22 protein {ECO:0000313|EMBL:AAF69498.3}; Gene name Name=CALD1 {ECO:0000313|EMBL:EAW83827.1} ORFNames=hCG_17453 {ECO:0000313|EMBL:EAW83827.1} Encoded on Name=CALD1 {ECO:0000313|EMBL:EAW83827.1}; ORFNames=hCG_17453 {ECO:0000313|EMBL:EAW83827.1 Keywords Coiled coil {ECO:0000256|SAM:Coils}. Cross-references EMBL AF247820; AAF69498.3; -; mRNA EMBL CH471070; EAW83827.1; -; Genomic_DNA UniGene Hs.490203; -; . ProteinModelPortal Q9NYG1; -; . STRING 9606.ENSP00000354826; -; . OGP Q9NYG1; -; . PeptideAtlas Q9NYG1; -; . PRIDE Q9NYG1; -; . eggNOG ENOG410IH1F; Eukaryota; . eggNOG ENOG410ZMZI; LUCA; . HOVERGEN HBG050785; -; . ChiTaRS CALD1; human; . GO GO:0006936; P:muscle contraction; IEA:InterPro; . InterPro IPR006017; Caldesmon; . InterPro IPR006018; Caldesmon_LSP; . PANTHER PTHR18949; PTHR18949; 1; . PANTHER PTHR18949:SF3; PTHR18949:SF3; 1; . Pfam PF02029; Caldesmon; 1; . PRINTS PR01076; CALDESMON; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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